Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANMLEVKHINKTYKGQVSYQALKQISFSIEEGEFTAVMGPSGSGKTTLLNIISTIDRPDSGDILINGENPHRLKRTKLAHFRRKQLGFVFQDFNLLDTLTIGENIMLPLTLEKEAPSVMEEKLHGIAAKLGIENLLNKRTFEVSGGQRQRAAIARAVIHKPSLILADEPTGNLDSKATKDVMETLQSLNRDDHVTALMVTHDPVS-ASYCRRVIFIKDGELFNEIYRGENRQVFYEQILDVLSMLGGNANDLSSVRL
1OXX Chain:K ((3-227))---RIIVKNVSKVFKKG-KVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIV-PPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPED----------------------------


General information:
TITO was launched using:
RESULT:

Template: 1OXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain K - contact count / total energy / energy per contact / energy per residue : 1160 -125009 -107.77 -558.07
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain K : 0.75

3D Compatibility (PKB) : -107.77
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_1OXX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OXX-query.scw
PDB file : Tito_Scwrl_1OXX.pdb: