Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKWTAADIPDQTGRTAVITGANTGLGFETAAALAAHGAHVVLAVRNLDKGKQAAARITEATPGAEVELQELDLTSLASVRAAAAQLKS-DHQRIDLLINNAGVMYTP---------RQTTADGFEMQFGTNHLGHFALTGLLIDRLLPVAGSRVVTISSVGHRIRAAIHFDDLQWERRYRRVAAYGQAKLANLLFTYELQRRLAPGGTTIAVASHPGVSNTEVVRNMPRPLVAVAAILAPLMQDAELGALPTLRAATDPA--VRGGQYFGPDGFGEIRGYPKVVASSAQSHDEQLQRRLWAVSEELTGVVYPVG |
| 2QQ5 Chain:A ((4-256)) | ----------PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ--------------YMFNVPYGVGKAACDKLAADCAHELRRH-GVSCVSLWPGIVQTELL---------------SSAETTELSGKCVVALATDPNILSLSGKVLPSC------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101983 for 1953 contacts (-52.2/contact) +
2D Compatibility (PS) -24563 + (NN) -14814 + (LL) 6180
1D Compatibility (HY) -5200 + (ID) 2750
Total energy: -143130.0 ( -73.29 by residue)
QMean score : 0.445
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