Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVRVGDPELVLDPYDYDFHEDPYPYYRRLRDEAPLYRNE---ERNFWAVSRHHDVLQGFRDSTALSNAYGV-SLDPSSRTSEAYRVMSMLAMDDPAHLRMRTLVSKGFTPRRIRELEPQVLELARIHLDSALQ-TESFDFVAEFAGKLPMDVISELIGVPDTDRARIRALADAVLHREDGVADVPPPAMAASIELMRYYADLIAEFRRRPANNLTSALLAAELDGDRLSDQEIMAFLFLMVIAGNETTTKLLANAVYWAAHHPGQLARVFADHSRIPMWVEETLRYDTSSQI--LARTVAHDLTLYDTTIPEGEVLLLLPGSANRDDRVFDDPDDYRIGREIGCKLVSFGSGAHFCLGAHLARMEARVALGALLRRIRNYEVDDDNVVRVHSSNVRGFAHLPISVQAR |
| 3WVS Chain:A ((10-401)) | -------PESLSYPFGPDEGLALSESYTRARDTDGLIRVKLPYGEPAWLATRYEDARLVLGDA-RFSRALSEEHDPPRARK-FNAQAKSMFNMDAPDHTRLRRLISKAFTIRRVEELRPKVHDLAHRLIDDMLAKGEPADLVADYALPIPTTVICELLGVPFEDREKFGRWTDAILSTSTL---NPEEGRVKRMELVGYIGGIIAARRAQPADDLISGMIEARDVQDKLTEQELLDHCIGLLIAGHETTASQIPSFVYALLDQPQHWKRLLDDPELIPSAVEELFRFVPLGSGSAAPRYAREDIEVGGTLVRAGEPVLVALGAANRDGLRFEDPEEIKLDRPS-NHHIGFGHGIHHCLGAPLARLELQEALRALLERLPTLKVA-GDIAWKSEMMVRGPRSMPVGW--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202739 for 3223 contacts (-62.9/contact) +
2D Compatibility (PS) -42044 + (NN) -23230 + (LL) 896
1D Compatibility (HY) -17200 + (ID) 6500
Total energy: -290817.0 ( -90.23 by residue)
QMean score : 0.481
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