Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MKAIFITGAGSGMGREGATLFHANGWRVGAIDRNEDGLAALRVQLGAE---RLWARAVDVTDKAALEGALADFCAGNVGGGLDMMWNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAALPYLKKAPGSLMFSTSSSSGTYGMPRIAVYSATKHAVKGLTEALSVEWQRHG--VRVADVLPGLIDTAILTSTRQHSDEGPYTISAEQIRAAAPKKGMFRLMPSSSVAEAAWRAYQHPTRLHWYVPRSIRWIDRLKGVSPEFVRRHIAK--SLATLEPKRK--- |
| 1XSE Chain:A ((22-295)) | NEKFRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMTFAEEFVAEAGNLM--GGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAMPMLMQSQGSIAVV-SSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNVSITLCILGLIDT-------------------ETAIKATSGIYLGPASPKEECALEIIKGTALRQD-EMYYVGSRWVPYLLGNPGRKIMEFLSAAEYNWDNVLSNEKLYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96869 for 2077 contacts (-46.6/contact) +
2D Compatibility (PS) -27751 + (NN) -15191 + (LL) 1264
1D Compatibility (HY) -11200 + (ID) 3100
Total energy: -152847.0 ( -73.59 by residue)
QMean score : 0.399
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