Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITM------GH-TIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMA---SG-AEVVGSLEEALT-----------SPETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDETWRGETGEWRFSRSGLRYRLYSYHRS
3CSE Chain:A ((6-155))
VVGIVAALLPEMGIGFQGNLPWRLAKEMKYFREVTTLTNDNSKQNVVIMGRKTWESIPQKFRPLPKRINVVVSRSFDGELRKVEDGIYHSNSLRNCLTALQSSLANENKIERIYIIGGGEIYRQSMDLADHWLITKIMPLPET--TIPQMDT-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CSE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74609 for 861 contacts (-86.7/contact) +
2D Compatibility (PS) -13765 + (NN) -4889 + (LL) 1852
1D Compatibility (HY) -8000 + (ID) 2200
Total energy: -101611.0 ( -118.02 by residue)
QMean score : 0.678
(partial model without unconserved sides chains):
PDB file :
Tito_3CSE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CSE-query.scw
PDB file :
Tito_Scwrl_3CSE.pdb
: