Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVHGFLLERVSVVRDE---ATVLRQVSAHFPAGRCSAVRGASGSGKTTLLRLLNRLIDPT---SGKVWLDGVPLTDLDVLVLRRRVGLVAQAPVVLTDAVLNEVRVGRPDLPEGRVTELLARLCLGQSAR----------------EAFLPHQRSALRTALIPAIDSTKVVGLISLPGAMSGLILAGVDPLTAIRYQIVVMYLLLAATAVAALTCARLAERALFDRAHRLVSLPAATRRA
3WMG Chain:A ((350-529))
----GIVFENVHFRYPTRMNVEVLRGISLTIPNGKTVAIVGGSGAGKSTIIQLLMRFYDIEPQGGGLLLFDGTPAWNYDFHALRSQIGLVSQEPVLFSGTIRDNILYGKRDATDEEVIQALREANAYSFVMALPDGLDTEVGERGLALSGGQKQRIAIARAILKH-----------PTLLCLDESTSALDAESEA----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WMG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84561 for 1076 contacts (-78.6/contact) +
2D Compatibility (PS) -16790 + (NN) -5636 + (LL) 6936
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -109351.0 ( -101.63 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_3WMG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WMG-query.scw
PDB file :
Tito_Scwrl_3WMG.pdb
: