Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDDAFSEEGSAQPRHDAQRPALAPRSDGFDIHTYHPDFVADPYPLLRLIRSRAPVCRDQASIWWISRYADVSACLRDRRFSADPARLGAAGVRQGGASWFGHQQLQPLARFYDNFMLFNDAPRHTRLRRLFAPAFGPDAVRRWEARIEVLVEELLDSLLERREPDLLRDFAEPLTIRVAAELFGFPREDTGQLLPWGRDLAAGLDLAASHGDAGQINRSAVAFSDYLQRQARGWSDGSSRPPSGAAPSILDGAAMLEAGLGLEDLVAAYAMVFMAAFETTISMVGNATLALLTHPDQLDLLRRCPELAANAVEELLRFDGAVRGGVRCTLEEVEIGGQRIPPGEKVWLSFLAANRDPEMFAAPDRLQLQRANAKQHVAFAHGPHYCLGAYLARLELQCALRGLVRRRFALASEPTD---LRWRRSSVFRTLERLPIVPEGDAQKTCE |
3BUJ Chain:A ((9-397)) | -----------------------------------ADVRRDPYPSYHWLLRHDPVHRGAHRVWYVSRFADVRAVLGDER-FARTGIRRF---------WTDLVGPGLLAEIVGDIILFQDEPDHGRLRGVVGPAFSPSALRRLEPVIAGTVDDLLRPALARGAMDVVDELAYPLALRAVLGLLGLPAADWGAVGRWSRDVGRTLDRGASAEDMRRGHAAIAEFADYVERALAR----RRREGGEDLLALMLDAHD-RGLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPDLLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP-VPSMSFGAGMRYCLGSYLARTQLRAAVAALARLPG-LR-LGCASDALAYQPRTMFRGLASLPIAFTPGG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BUJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244996 for 3281 contacts (-74.7/contact) +
2D Compatibility (PS) -41657 + (NN) -23205 + (LL) 2368
1D Compatibility (HY) -26000 + (ID) 6850
Total energy: -340340.0 ( -103.73 by residue)
QMean score : 0.530
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