Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNVFVFSRLAPEHLERLQC-QFNVRVLEPKQGDIDAQYAAALPDTHGMIG-VGRPLGARQLEQAKQLEVISSVSVGYDNYDLDYLNRRGIALTNTPDVLTETTADLGFALLISAARRVAELDAWVKAGNWKRTVDAPQFGTDVHGKKLGILGLGRIGAAIARRGRFGFGMQVLYHGNNRKPELEQELGARFLGFDELLGEADFVCVVVPLGAQTRQLIGARELGLMKPSAILVNVARGQVVDEAALVAALREKRILGAGLDVYEKEPLA-ESPLFALDNVVTLPHIGSATHETRRAMAERALQNFEAALRGERPLDLVNPQVWRRG |
| 1WWK Chain:A ((4-307)) | --MKVLVAAPLHEKAIQVLKDAGLEVIYEEYP--DE-DRLVELVKDVEAIIVRSKPKVTRRVIESAPKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKK---EAMGIELEGKTIGIIGFGRIGYQVAKIAN-ALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKILKG--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207816 for 2529 contacts (-82.2/contact) +
2D Compatibility (PS) -33428 + (NN) -18853 + (LL) 1344
1D Compatibility (HY) -24000 + (ID) 5300
Total energy: -288053.0 ( -113.90 by residue)
QMean score : 0.576
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