Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERNRLY---------VDS-----QGGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQRFVG--DESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGHALAT--SLEDRQRFAGVFDTALQGSSRTPEALGGERSYQPVRSPAPLG- |
| 4H2Q Chain:A ((10-379)) | -KTRRAEVA--GGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQ-GSHTPPTYETWMHNKSVSKETFNGLP----WRIMTRSHLHDALVNRARAL---GVDISVNSEAVAADP---VGRLTLQTGEVLEADLIVGADGVGSKVRDSI--------GFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPA-------ADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLE----EGSSVEDALVAWETRIRPITDRCQALSGDYAANRSLSKGNMF-------------TPAALEAAR-YDPLRRVYSWPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199658 for 3157 contacts (-63.2/contact) +
2D Compatibility (PS) -37273 + (NN) -10099 + (LL) 4088
1D Compatibility (HY) -15200 + (ID) 4250
Total energy: -262392.0 ( -83.11 by residue)
QMean score : 0.404
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