Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAKPSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVG--GVIAGWVEALQLMNAGSKWRLHVPSELAYGGQAV-GSIPPHSVLVFDVELLEIL |
2PBC Chain:A ((1-96)) | ---------------------------------------------------------------------------------------------------------------GSPIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PBC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57294 for 645 contacts (-88.8/contact) +
2D Compatibility (PS) -9709 + (NN) 1042 + (LL) 7956
1D Compatibility (HY) -6800 + (ID) 2150
Total energy: -66955.0 ( -103.81 by residue)
QMean score : 0.487
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