Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEDFLLSNGYQLGKTIGEGTYSKVKEAFSKKHQRKVAIKVIDKMGGPEEFIQRFLPRELQIVRTLDHKNIIQVYEMLESADGKICLVMELAEGGDVFDCVLNGGPLPESRAKALFRQMVEAIRYCHGCGVAHRDLKCENALLQ-GFNLKLTDFGFAKVLPKSHRELSQTFCGSTAYAAPEVLQGIPHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKMLWQ--Q------------------QKGVSFPTH-----------LSISADCQDLLKRLLEPDMILRPSIEEVSWHPWLAST |
| 4BGQ Chain:A ((12-300)) | -------NKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFK-------VKETT-LRELKMLRTLKQENIVELKEAFRR-RGKLYLVFEYVEKNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE-----------TRWYRSPELLLGAPYG-KSVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPSEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTFQTQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126670 for 1777 contacts (-71.3/contact) +
2D Compatibility (PS) -25534 + (NN) -10232 + (LL) 1536
1D Compatibility (HY) -14800 + (ID) 3800
Total energy: -179500.0 ( -101.01 by residue)
QMean score : 0.457
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