Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSN-QPYEIKRGDRIAQILIAPVFRVIWDDAERLCT---EETERSAGGFGSSGR
3HZA Chain:A ((24-170))
---------TLAIVRL--DPGLPLPSRAHDGDAGVDLYSAED--VELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGWGSSGG
General information:
TITO was launched using:
RESULT:
Template:
3HZA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86285 for 919 contacts (-93.9/contact) +
2D Compatibility (PS) -15304 + (NN) -3458 + (LL) 656
1D Compatibility (HY) -10800 + (ID) 3250
Total energy: -118441.0 ( -128.88 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_3HZA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HZA-query.scw
PDB file :
Tito_Scwrl_3HZA.pdb
: