Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNG-----------YYDGITFHRVINDFMIQGGDPTA-TGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE----------------------------------------------------------------------------------------------------------------- |
| 1IIP Chain:A ((2-298)) | SHPSPQAKPSNPSNPRVFFDVDIGG------ERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITT----------------------------VPTPHLDGKHVVFGQVIKGMGVAKILENVEVK-GEKPAKLCVIAECGELKEGDDWGIFPKDGSGDSHPDFPEDADVDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36375 for 1308 contacts (-27.8/contact) +
2D Compatibility (PS) -17011 + (NN) -5541 + (LL) 2156
1D Compatibility (HY) -7600 + (ID) 3550
Total energy: -67921.0 ( -51.93 by residue)
QMean score : 0.468
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