Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVFDYEDVQLIPNKCIVNSRSECDTTVILG-KHAFKMPIVPANMQTIINESIAEFLAENGYFYIMHRFNG-----SARIP-----FVKKMKERQLISSIS--------------V--GVKKEECLFVEELAKQGLTPDYITIDIAHGHSNSVIEMIQRIKTRLPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA---RKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIENGIAYKEYFGSASE--FQK---GEKKNIEGKKIWIQHKGSLKNTLIEMHQDLQSSISYAGGRDLEAIRKV-DYVIVKNSIFNGDTI |
| 2CU0 Chain:A ((13-469)) | -KGYTFDDVLLIPQATEVE-PKDVDVSTRITPNVKLNIPILSAAMDTVTEWEMAVAMAREGGLGVIHRNMGIEEQVEQVKRVKRAE---------------KYKNAVRDENGELLVAAAVSPFDIKRAIELDKAG--VDVIVVDTAHAHNLKAIKSMKEMRQKV-DADFIVGNIANPKAVDDL--TFADAVKVGIGPGSICTTRIVAGVGVP--QITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKYMKTRKFVPEGVEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEKGEFVIITHAGIKESHP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152156 for 2656 contacts (-57.3/contact) +
2D Compatibility (PS) -33092 + (NN) -9528 + (LL) 1824
1D Compatibility (HY) -18800 + (ID) 5000
Total energy: -216752.0 ( -81.61 by residue)
QMean score : 0.464
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