Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELNKFVGNKIKQYREERGLNQEALAEKLHTTRQTISRYENGDRKANQDVLFELAKIFNKRLDDFFPERNLPPVDERLVTIAAHIDDDVTEEEMRDILAYIEMKKKLHRGM
1UTX Chain:A ((1-66))
-----MIINNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIFQWQPE----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UTX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19204 for 426 contacts (-45.1/contact) +
2D Compatibility (PS) -7482 + (NN) -5451 + (LL) 3912
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -35125.0 ( -82.45 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_1UTX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UTX-query.scw
PDB file :
Tito_Scwrl_1UTX.pdb
: