Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------LEKERFRTELIGEKIGQLCKTYQFTYGYRKIAALMKQEEQVGINKVQ----RIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRN-----FQASQPLEKLTTDITYLYFGDCRLYLSSIMDLYNGEIVAYSIGEKQTQN------ |
4LTB Chain:A ((2-172)) | SLSQASADLEATLRHKLTVMYSQINGASRALDDVRNRQQDVRMTANRKVEQLQQEYTEMKALLDASETTSTRKIKEEEKRVNSKFDTIYQILLKKKSEIQTLKEEIEQSLTKRDEFEFLEKASKLRGISTKPVYI--PEVELNHKLIKGIHQSTIDLKNELKQCIGRLQELTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LTB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7015 for 566 contacts (12.4/contact) +
2D Compatibility (PS) -13540 + (NN) -1865 + (LL) 224
1D Compatibility (HY) -1200 + (ID) 1100
Total energy: -10466.0 ( -18.49 by residue)
QMean score : 0.288
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