Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MTDYPSIFEPLTVKRMTIKNRVIMPPMGTNLAGLNGEFLEEHMNYYEQRAKGGTGLITIENACVDFPYGTNGTTQLRIDNDQYIPGFYKLTERLHKHGTCVSIQINHAGASAYPARLNGLQPVSASDIPSKKGGTVP---RPLTVEEIYEIVNKYGDAARRAQQAGFDAVEIHGGHSY-LLCQFLSPLYNKRTDEFGGTPENRARIVKLILEKVRAEVGPFFPIVLRFSADEFTEGGNHLEDILELLDYCQEEADILNVSAAINDNLYLQIDQMNLEDGWRSYLAKAVKDKFNKPTITSGNIRSPKAAEKILSEGYADLLAMGRGLIAEPNWVNKVATGQEDMLRKCISCNIGCADHRISKSKPIRCTVNPDIIHEDKY-----KETKVTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGGLARAIANLPDKSRIADFPNYLANRAEKLTNLKVITGTKADTALIDTFNPDVVVNATGSKPLLPPIKGL--LDVIDKEGSKVHSIFGLISNIDDFTEFSNKKVAVIGGGA--VGLDVVEYFSERGSDVTIVEMMPLLGKDLDMIT-RLSMMDIIEKNHVDVQTETALTEVAADHFKVK--HDGVDAEIPFDYGFVCLGMRPERPLMEELAAYGKEKQIEIVN-IGDSAATRKILEGVREGRNILTTLEKIGSL-------------- |
| 3K30 Chain:A ((7-690)) | VAAPYDVLFEPVQIGPFTTKNRFYQVPHCN---GMGYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEGGGLAGIELAHNGMNA-PNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAP--EGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRDGRLNLIRECIGCNICVSGDL--TMSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAG----RLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPREELYLDLVARRDAGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLPSNDEVPFRREVTQLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -317851 for 6047 contacts (-52.6/contact) +
2D Compatibility (PS) -71484 + (NN) -32136 + (LL) 972
1D Compatibility (HY) -18400 + (ID) 8450
Total energy: -447349.0 ( -73.98 by residue)
QMean score : 0.472
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