Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METRELKNGQIMMIRKATKEDSSNIITYLNEVAGETDYLSFGQGEFAFSIAEEAEYIEESDKNPGSVMLLCFIDDELASISQLIGHIK-KRELHTSELAISIRKKYWGLGIGTICMEELIKYAKSSEYLKLIYLEVVTENKRAINLYKKFGFIEAGEIPALMQVDRRYLDVTMMYLVI
1YR0 Chain:A ((4-165))
----------SVELRDATVDDLSGIMEIYNDAVVNTT-AIW-NE-VVVDLENRKDWFAARTS-RGFPVIVAILDGKVAGYASYGDWRAFDGYRHTREHSVYVHKDARGHGIGKRLMQALIDHAGGN-DVHVLIAAIEAENTASIRLHESLGFRVVGRFSEVGTKFGRWLDLTCMELK-
General information:
TITO was launched using:
RESULT:
Template:
1YR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114796 for 1171 contacts (-98.0/contact) +
2D Compatibility (PS) -17280 + (NN) 469 + (LL) 928
1D Compatibility (HY) -8000 + (ID) 1800
Total energy: -140479.0 ( -119.96 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_1YR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YR0-query.scw
PDB file :
Tito_Scwrl_1YR0.pdb
: