Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAPNPTQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKAIVPLNDVKGLDDVVKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYDAASKGNAFVE-D-GKLVADDKAGTELLTFMSELQKNKLLLA---SKATDPFETGTSIMADNGPWTFPNWDEKFPELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQATDKEKEAAMDFLKFVYNDDKNDLKFLETTNLIPARDDATENETFTAFFKENPELEVYAANVPYSIPAMDDAKYNDIQQIIGEEAWNPIVRG--EKKPTKAWSDMKKAEDGVLQE |
| 1ELJ Chain:A ((4-380)) | ---------------------------------EEGKVVIWHAMQPNELEVFQSLAEEYMALCPEVEIVFEQKP---NLEDALKAAIPTGQGPDLFI-WAHDWIGKFAEAGLLEPIDEYVTE-D-LLNEFAPMAQDAMQY-KGHYYALPFAAETVAIIYNKEMVSE-----PPKTFDEMKAIMEKYYDPANE--KYGIAWPIN--A---Y--FISAIA-QAFGGYYFDDKTEQPGLDKPETIEGFKFFFTEIWPYMAPTGDYNTQQSIFLEGRAPMMVNGPWSINDVKKA----G--INFGVVPLPPIIKDGKEYWPRPYGGVKLIYFAAGIKN--KDAAWKFAKWLTTSEESIKTLALELGYIPVLTKVLDDPEIKN----DPVIYGFGQAVQHAYLMPKSPKMSAVWGGVDG-AINEILQDPQNADIEGILKKYQQEILNNMQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ELJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54525 for 3240 contacts (-16.8/contact) +
2D Compatibility (PS) -38366 + (NN) -8607 + (LL) 3964
1D Compatibility (HY) -16000 + (ID) 3100
Total energy: -116634.0 ( -36.00 by residue)
QMean score : 0.367
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