Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINSQDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDRLYSYVLYNPKIRSHSVQQACLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNGIMFYDHINKENPSYLPPDVDVFG--
1G2A Chain:A ((1-164))
--SVLQVLHIPDERLRKVAKPVE-EVNAEIQRIVDDMFETMYAE------------EGIGLAATQVDIHQRIIVIDVSENRDE--RLVLINPELLEKSGETG---IEEGCLSIP-EQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL
General information:
TITO was launched using:
RESULT:
Template:
1G2A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65605 for 1260 contacts (-52.1/contact) +
2D Compatibility (PS) -17221 + (NN) -2070 + (LL) 1844
1D Compatibility (HY) -16000 + (ID) 2650
Total energy: -101702.0 ( -80.72 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_1G2A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G2A-query.scw
PDB file :
Tito_Scwrl_1G2A.pdb
: