Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGEAIVITSGKGGVGKTTSTANLGTALALQGKKVCLIDMDIGLRNLDVVLGLENRIIYDLVDVVEGRCKIHQAMIKDKRFDDLLFLLPAAQTTDK-NAVSGEQMVDLINQLRPDYDFILIDCPAGIETGYKNAVAGADKAIVVTTPEISAVRDADRIIGLLEKEDIEPPKLIINRIRTQMMMNGDVMDIDEITTHLSIELLGIIIDDDEVIRSSNSGDPVAML-PNNRASQGYRNIARRILGESIPLMSIETKKAGFFARLKQLFSGK
1G3Q Chain:A ((1-236))
MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPD-VTLHDVLAGEANVEDAIYMT-QFDN-VYVLPGAVDWEHVLKADPRKLPEVIKSLKDKFDFILIDCPAGLQLDAMSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNRYGRSDRD----IPPEAAEDVMEVPLLAVIPEDPAIREGTLEGIPAVKYKPESKGAKAFVKLAEEIEKL-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1G3Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -175742 for 2193 contacts (-80.1/contact) +
2D Compatibility (PS) -24812 + (NN) -5429 + (LL) 2200
1D Compatibility (HY) -16800 + (ID) 3650
Total energy: -224233.0 ( -102.25 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_1G3Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G3Q-query.scw
PDB file :
Tito_Scwrl_1G3Q.pdb
: