Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSPESAQREIQLFFAPDEILSYQKAVDTWI
1ZS6 Chain:A ((21-167))
HERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADELLCWEDSAGHWL
General information:
TITO was launched using:
RESULT:
Template:
1ZS6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64556 for 1092 contacts (-59.1/contact) +
2D Compatibility (PS) -15551 + (NN) -3606 + (LL) 0
1D Compatibility (HY) -15200 + (ID) 3700
Total energy: -102613.0 ( -93.97 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_1ZS6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZS6-query.scw
PDB file :
Tito_Scwrl_1ZS6.pdb
: