Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRFLDSDAMGDEELVERTLRPQYLREYIGQDKVKDQLKIFIEAAKL-------RDESLDHVLLFGPPGLGKTTMAFVIANELGVNLKQTSGPAIEK------SGDLVAILND--LEPGDVLFIDEIHRMPMA-----VEEVLYSAMEDFYIDIMIGAGETSRSVHLDLPPFTLIGATTRAGMLSNPLRARFGITGHMEYYEENDLTEIIERTADIFEMKITYEAASELARRSRGTPRI-ANRLLKRVRDYAQIMGDGLIDDNITDKALTMLDVDHEGLDYVDQKILRTMIEMYNGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFIMRTRTGRVATDKAYEHLGYQRFDK |
| 3D8B Chain:A ((76-304)) | -----------------DHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQESSRRIKTEFLVQLDG------------------SEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIRSLQTVRPIAYIDFENAFRTVRPSVSPKDLELYENWNKTFGCGK-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91768 for 1492 contacts (-61.5/contact) +
2D Compatibility (PS) -21627 + (NN) -9992 + (LL) 5668
1D Compatibility (HY) -6800 + (ID) 1850
Total energy: -126369.0 ( -84.70 by residue)
QMean score : 0.367
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