Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIHIEAKQGEIADKILLPGDPLRAKFIAENFLEDAVCFNTVRNMFGYTGTYKGHRVSVMGTGMGMPSISIYARELIVDYGVKTLIRVGTAGAINPDIHVRELVLAQAAATNSNIIRNDWPE--FDFPQIADFKLLDKAYHIAKEMDITTHVGSVLSSDVFYSNQPDRNMALGKLGVHAIEMEAAALYYLAAQHNVNALAMMTISDNLNNPEEDTSAEERQTTFTDMMKVGLETLISE
1JE0 Chain:A ((3-236))
-PVHILAKKGEVAERVLVVGDPGRARLLST-LLQNPKLTNENRGFLVYTGKYNGETVSIATHGIGGPSIAIVLEELA-MLGANVFIRYGTTGALVPYINLGEYIIVTGASYNQGGLFYQYLRDNACVASTPDFELTNKLVTSFSKRNLKYYVGNVFSSDAFYAEDEEFVKKWSSRGNIAVEMECATLFTLSKVKGWKSATVLVVSDNLA--------EELEKSVMDGAKAVLDTLTS-
General information:
TITO was launched using:
RESULT:
Template:
1JE0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163528 for 1925 contacts (-84.9/contact) +
2D Compatibility (PS) -23751 + (NN) -9678 + (LL) 504
1D Compatibility (HY) -13600 + (ID) 3750
Total energy: -213803.0 ( -111.07 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_1JE0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JE0-query.scw
PDB file :
Tito_Scwrl_1JE0.pdb
: