Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLED-----NYWYTAEPASDFYHKYPVDLALAEEYGVNGIRISIAWSRIFPTGY-GEVNLKGVEFYHKLFEECHKRHVEPFVTLHHFDTPEALHSNGDFLNRDNIEHFVNYAAFCFEEFP-EVNYWTTFNEIGPIGDGQYLVGKFPPGIQYD-LAKVFQSHHNMMVSHARAVKLYKDKGY---KGEIGVVHALPTKYPLDPENSADVRAAELEDIIHNKFILDATYLGYYSEMTMAGVK----------HILKENGGELDLREEDFQALEAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGS-SKYQIKGVGRRVAPDYVPKTDWDWI-IYPQGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSEAI-SDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFET--QERYPKKSAHWYKQVAKTQIIE |
| 1WCG Chain:A ((3-463)) | --YKFPKDFMFGTSTASYQIEGGWNEDGKGENIWDRLVHTSPEVIKDGTNGDIACDSYHKYKEDVAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQYLQDLGGWVNPIMSDYFKEYARVLFTYFGDRVKWWITFNEPIAVC-KGYSIKAYAPNL-NLKTTGHYLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMPKNAESDDDIETAERANQFERGWFGHPVYKGDYPPIMKKWVDQKSKEEGLPWSKLPK------FTKDE---IKLLKGTADFYALNHYSSRLVTFGSDPN---------PNFNPDASYVTS---VDEAWLKPNETPYIIPVPEGLRKLLIWLKNEYGN-PQLLITENGYGDDGQ-----LDDFEKISYLKNYLNATLQAMYEDKCNVIGYTVWSLLDNFEWFYGYSIHFGLVKIDFNDPQRTRTKRESYTYFKNVVSTGKP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174358 for 3909 contacts (-44.6/contact) +
2D Compatibility (PS) -46472 + (NN) -18643 + (LL) 1324
1D Compatibility (HY) -28000 + (ID) 6400
Total energy: -272549.0 ( -69.72 by residue)
QMean score : 0.708
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