Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSYGDSREKILSAATRLFQLQGYYGTGLNQIIKESGAPKGSLYYHFPGGKEQLAIEAVNEMKEYIRQKIADCMEACTDPAEGIQAFLKELSCQFSCTEDIEGLPVGLLAAETSLKSEPLREACHEAYKEWASVYEEKL----RQTGC-SESRAKEASTVVNAMIEGGILLSLTAKNSTPLLHISSCIPDLLKR
1VI0 Chain:A ((8-187))----PKYMQIIDAAVEVIAENGYHQSQVSKIAKQAGVADGTIYLYFK-NKEDILISLFKEKMGQFIERMEEDIKEKATAKEKLALVISKHFSLLAG-DHN-LAIV--TQLELRQSNLELRQKINEILKGYLNILDGILTEGIQSGEIKEGLDVRLARQMIFGTIDETVTTWVMNDQKYDLVALSNSVLE----


General information:
TITO was launched using:
RESULT:

Template: 1VI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 635 -84292 -132.74 -481.67
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -132.74
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_1VI0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VI0-query.scw
PDB file : Tito_Scwrl_1VI0.pdb: