Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQTTASITTAQWQQKRDQFVSKGVSNGNRS----LAVKGEGAELYDLDGRRFIDFAGAIGTLNVGHSHPKVVEAVKRQAEELIH--PGFNVMMYPTYIELAEKLCGIAPGSHEKKAIFLNSGAEAVENAVKIARKYTKRQG--------VVSFTRGFHGRTNMTMSMTSKVKPYKFGFGPFAPEVYQAPFPYYYQKPAGMSDESYDDMVIQAFNDFFIASVAPETVACVVMEPVQGEGGFIIPSKRFVQHVASFCKEHGIVFVADEIQTGFARTGTYFAIEHF-DVVPDLITVSKSLAAG-LPLSGVIGRAEMLDAAAPGELGG----TYAGSPLGCAAALAVLDIIEEEGLNERSEEIGKIIEDKAYEWKQEFP-FIGDIRRLGAMAAIEIVKDPDTREPDKTKAAAIAAYANQNGLLLLTAGINGNIIRFLTPLVISDSLLNEGLSILEAGLRA-
2OAT Chain:A ((36-439))---GPPTSD--DIFEREYKYGAHNY-----HPLPVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALK-SQVDKL-TLTSRA-FYNNVLGEYEE-YITKLF--NYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTS-YDGFGPFMPGFDIIPYND-----------------LPALERALQDP----NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYEN-VRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKP---G-EHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPS---DVVTAVRGKGLLNAIVIKETK------DWDAWKVCLRLRDNGLLAKPTH--GDIIRFAPPLVIKEDELRESIEIINKTILSF


General information:
TITO was launched using:
RESULT:

Template: 2OAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2119 -240157 -113.33 -628.68
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -113.33
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_2OAT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OAT-query.scw
PDB file : Tito_Scwrl_2OAT.pdb: