Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVHIGAEKGQIADTVLLPGDPLRAKFIAETYLENVECYNEVRGMYGFTGTYKGKKISVQGTGMGVPSISIYVNELIQSYDVQNLIRVGSCGAIRKDVKVRDVILAMTSSTDSQMNRVAFGSVDFAPCADFELLKNAYDAAKDKGVPVTVGSVFTADQFYND-DSQI-EKLAKYGVLGVEMETTALYTLAAKHGRKALSIL--TVSDHVLTGEE-TTAEER---QTTFHDMIEVALHSVSQ
4MCH Chain:A ((25-262))KQPHICVDENQVSPYVIVCGEPDRVNRIVELM-DNVELLAENREYRVFNGVYKGTTITICSTGIGAPSMIIAVEELK-LCGATHVIRVGSAGAMQDHIQLGELIVAEGAVRDEGGSKAYISS-AYPAYASFALLKEISHFLENQSVKYYFGVVRSHDSFYTDEEDQLCQYWNKKGILGADMETSALFTVGRLRGLQVASILNNVVLYQ---EGVNQYVNDNKAMMNGERLAAITALETLC-


General information:
TITO was launched using:
RESULT:

Template: 4MCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1277 -118064 -92.45 -522.40
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -92.45
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_4MCH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MCH-query.scw
PDB file : Tito_Scwrl_4MCH.pdb: