Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAVAAGALVVETDSFRLRLLDGLVASIGERGYRATTVSDIVRHARTSKRTFYDRFTSKEQCFLELLLADNETLGNSIRAAVDPNADWHDQIRQAVEAYVTHIESRPAVTLSWIREFPSLGAAAYPVQRRGMEQLTSLLIELSASPGFRRANLPPLNVPLAVILLGGLRELTALTVEDGQPIRNIVEPAVDASIALLGPRS
2IU5 Chain:A ((1-179))
ME---------KSIITQKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFYNYFQNQEELLSWIFENDFAELINDNSD--------YYGWQNELLLLLRYLDENQIFYQKIFVIDKNFEHFFLIQWENLLDKVIFDQEKKSDYH-----WSDLEKSFICRYNAAAICAITRESIIRGNSLEKLYSQIVNLLLAQIKIFE
General information:
TITO was launched using:
RESULT:
Template:
2IU5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69161 for 1266 contacts (-54.6/contact) +
2D Compatibility (PS) -19308 + (NN) -9429 + (LL) 1724
1D Compatibility (HY) -6800 + (ID) 1000
Total energy: -103974.0 ( -82.13 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_2IU5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IU5-query.scw
PDB file :
Tito_Scwrl_2IU5.pdb
: