Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSVMSHEFQLATAETWPNPWPMYRALRDHDPVHHVVPPQRPEYDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLHDTPPMVMQDPPVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRA-NGGGDIVTELFKPLPSMVVAHYLGVPEEDWTQFDGWTQAIVAANAVDGATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEELLRLTSPVQG---LARTTTRDVTI-GDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESR--IVWSGGSYVRRPLSVPFRVTS |
4WPZ Chain:A ((6-397)) | ----------FPDPPSV-ELPPELAEIRDGQSVVEVKFP--DGISGWMVTKHADVRKVLVDS-RFSSKV---------TETGKLMNESLVGMDAPEHTRLRKLVTKAFTARRVETLRPRITELVGQLLDELETLPRPVDLVKNFSVPLPVRVICELLGVPAGDQDTFHAWSNALLG-DW-QQV-VEKEAATVSLVNYFGELIAVKRENPADDLISELIAISD--GDSTLTEREIIALSIGILSAGHETTANQISMFLVTLLHNPEELDKLRDNREAIPKAVDELLRFVPLTTTGGIIPRLTTAEVELSGGQVLPAGAVVLPAVATANRDPEVF-EDGERLNVTRENNPHLAFGAGIHHCLGAQLARIELQEALGAILDRMPQVRLAVPESELRLKSASIIRGLESLPITW-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210156 for 3025 contacts (-69.5/contact) +
2D Compatibility (PS) -40306 + (NN) -20699 + (LL) 1784
1D Compatibility (HY) -24000 + (ID) 6050
Total energy: -299427.0 ( -98.98 by residue)
QMean score : 0.466
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