Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLSVAPKEIAGHGLLDGKVVVVTAAAGTGIGSATARRALAEGADVVISDHHERRLGETAAELSALGLGRVEHVVCDVTSTAQVDALIDSTTARMGRLDVLVNNAGLGGQTPVADMTDDEWDRVLDVSLTSVFRATRAALRYFRDAPHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAAEYGVRINAVSPSIARHKFLDKTASAELLDRLAAGEAFGRAAEPWEVAATIAFLASDYSSYLTGEVISVSCQHP
3GAF Chain:A ((5-251))
-----------SPFHLNDAVAIVTGAAA-GIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ-AGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGV
General information:
TITO was launched using:
RESULT:
Template:
3GAF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127369 for 2137 contacts (-59.6/contact) +
2D Compatibility (PS) -26826 + (NN) -6257 + (LL) 1220
1D Compatibility (HY) -10800 + (ID) 3750
Total energy: -173782.0 ( -81.32 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_3GAF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GAF-query.scw
PDB file :
Tito_Scwrl_3GAF.pdb
: