Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVVLYKRLSAP-LMERLRERVEVLLVEEPGRDGLARLRD-ALPEAHGLLG-ASLRLDAGLLDLAPRLEAIASVSVGVDNYDIDYLDRRGILLSNTPDVLTETTADTGFALILATARRVVELAGWVRAGEWKKSVG----AAQFGTDVHGKTLGIVGMGRIGEALARRGHHGFGMRVLYHSHSPKPHVEERYAASY-RPLDALLEESDFVCLTLPLTAATEGLIGAAQFARMRPQAIFINISRGRVVDEAALIEALAQRRIRAAGLDVFEREPLSP-DSPLLRLPNVVATPHIGSATEETREAMARCAVDNLLAALAGARP---LNLVNPSAWARRRGA |
| 1MX3 Chain:A ((21-346)) | MPLVALLDGRDCTVEMPILKDVATVAFCDA---QSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAK-AFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVN---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219694 for 2577 contacts (-85.3/contact) +
2D Compatibility (PS) -33646 + (NN) -14382 + (LL) 380
1D Compatibility (HY) -16400 + (ID) 5300
Total energy: -289042.0 ( -112.16 by residue)
QMean score : 0.492
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