Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAG----IDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAKPSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVGGVIAGWVEALQLMNAGSKWRLHVPSELAYGGQAVGS-IPPHSVLVFDVELLEIL--
1FD9 Chain:A ((9-212))
-------TDKDKLSYSIGADLGKNFKNQGID-VNPEAMAKGMQDAMSGAQLALTEQQMKDVLNKFQKDLMAKRTAEFNKKADENKVKGEAFLTENKNKPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQVSQVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKKS
General information:
TITO was launched using:
RESULT:
Template:
1FD9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58753 for 1314 contacts (-44.7/contact) +
2D Compatibility (PS) -21871 + (NN) -8936 + (LL) 436
1D Compatibility (HY) -16000 + (ID) 4200
Total energy: -109324.0 ( -83.20 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_1FD9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FD9-query.scw
PDB file :
Tito_Scwrl_1FD9.pdb
: