Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDDGSVSDIKRGRAARNAKLASIPVGFAGRAALGLGKRLTGKSKDEVTAELMEKAANQLFTVLGELKGGAMKVGQALSVMEAAIPDEFGEPYREALTKLQKDAPPLPASKVHRVLDGQLGTKWRERFSSFNDTPVASASIGQVHKAIWS-DGREVAVKIQYPGADEALRADLKTMQRMVGVLKQLSPGADVQGVVDELVERTEMELDYRLEAANQRAFAKAYHDHPRFQVPHVVASAPKVVIQEWIEGVPMAEIIRHGT---TEQRDLIGTLLAELTFDAPRRLGLMHGDAHPGNFMLL---PDGRMGIIDFGAVAPMPGGFPIELGMTIRLAREKNYDLLLPTMEKAGLIQRGRQVSVREIDEMLRQYVEPIQVEVFHYTRKWLQKMTVSQIDRSVAQIRTARQMDLPAKLAIPMRVIASVGAILCQLDAHVPIKALSEELIPGFAEPDAIVV |
| 5IG1 Chain:A ((22-171)) | -----------------------------------------------------------------------------------------------------------------------------------RSVIGKGAFSTVHRCVNKRTGEVCAVKVIALKSLR--SSEINKIKREIGICS-------------------------SLQHEHIVSMRRAFRDESHFY-----------LVFEYVSGGELFDEIVTRKFYNEKDASACMHQILSA-LQHCHSKNIIHRDLKPENLLLASKDPNAPVKITDFGLAVIMEQ-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5IG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60509 for 973 contacts (-62.2/contact) +
2D Compatibility (PS) -15755 + (NN) -8916 + (LL) 23384
1D Compatibility (HY) -8800 + (ID) 1300
Total energy: -71896.0 ( -73.89 by residue)
QMean score : 0.221
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