Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRVHVAAAVIRGSDGRVLIARRPEDKHQGGLWEFPGGKVEDGEPVRAALARELEEELGIRVERARPLIQVRHDYADKHVLLDVWEVDGFSGEAHGAEGQPLAWVEPRELADYEFPAANAPIVQAARLPAHYLITPDGLEPGELISGVRKAVEAGIRLIQLRAPNMFSPEYRDLAIDIQGLCAGK-AQLMLKGPLEWLGDFPAAGWHLTSAQLRKYASAGRPFPEGRLLAASCHDAEELALAASMGVEFVTLSPVQPTESHPGEPALGWDKAAELIAGFNQPVYLLGGLGPQQAEQAWEHGAQGVAGIRAFWPGGL |
1XI3 Chain:A ((10-197)) | ---------------------------------------------------------------------------------------------------------------------------NLRNKLKLYVITDRRLKP--EVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYDALFFVDDRVDVALAVDADGVQLGPEDMPIE--VAKEIAPNLIIGASVYSLEEALEAEKKGADYLGAGSVFPT----DARVIGLEGLRKIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVISAVMGAE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XI3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128347 for 1556 contacts (-82.5/contact) +
2D Compatibility (PS) -19588 + (NN) -8543 + (LL) 8708
1D Compatibility (HY) -10800 + (ID) 2000
Total energy: -160570.0 ( -103.19 by residue)
QMean score : 0.546
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