Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLSKFGSLAHLCGPGGVDHLPVKILQPAKADKESFEKAYQVGAVLGSGGFGTVYAGSRIADGLPVAVKHVVKERVTEWGSLGGATVPLEVVLLRKVGAAGGARGVIRLLDWFERPDGFLLVLERPEPAQDLFDFITERGALDEPLARRFFAQVLAAVRHCHS-CGVVHRDIKDENLLVDLRSGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYHGRSATVWSLGVLLYDMVCGDIPFEQDE------EILRGRLLFRRRVSPECQQLIRWCLSLRPSERP-----SLDQIAAHPWMLGADGGVPESCDLRLCTLDPDDVASTTSSSESL |
| 4GV1 Chain:A ((8-271)) | -------------------------------------NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEV--AHTLTENRVLQNSR----HPFLTALKYSFQTHDRLCFVMEYAN-GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184736 for 1958 contacts (-94.3/contact) +
2D Compatibility (PS) -26658 + (NN) -11760 + (LL) 2248
1D Compatibility (HY) -16800 + (ID) 3750
Total energy: -241456.0 ( -123.32 by residue)
QMean score : 0.436
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