Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDHSTSYGLITNIRPSPSWLSKLSFWRKKTLLISQFRTSVALYVNENNHILNAIKGSSLSKILDRVNIRDKDGLSALHLTVKGGNVNIVKLLLDGGAEPNIRSWMNLTTPLHNAVLNNRVYIVKLLFDSHANSNILSRSD-ISPLYFAVVNN-----------------
1YCS Chain:B ((37-165))----------------------------------PLALLLDSSLEGEFDLVQRIIYEVD------DPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADS-DGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM


General information:
TITO was launched using:
RESULT:

Template: 1YCS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48747 for 876 contacts (-55.6/contact) +
2D Compatibility (PS) -11854 + (NN) -5425 + (LL) 2952
1D Compatibility (HY) 400 + (ID) 1350
Total energy: -64024.0 ( -73.09 by residue)
QMean score : 0.429

(partial model without unconserved sides chains):
PDB file : Tito_1YCS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YCS-query.scw
PDB file : Tito_Scwrl_1YCS.pdb: