Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFNKLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENISAQQLKLLCE-KYNIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVKESTDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGFKLI--ETSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQENEHRNQILFKTIVPAR-IDK--TAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVTGQSLPNSIELLKPAVMMNLLGKDLDLLENEFNEHPEWHLHIYGKSGRKDSRKMGHMTVLTNDVNQTEQDMYAKFEGSN |
| 3AW8 Chain:A ((1-360)) | ----------MIGILGGGQLGRMLALAGYPLGLSFRFLDPSPEACAGQVGE-LVVGEFLDEGALLRFAEGLALVTYEFENVPVEAARRLEGRLPL-YPPAKALEVAQDRLREKTFFQGLGVPTPPFHPVDGPEDLEEGLKRVGLPALLKTRR------GQALVRTEEEAL--EALKALGGRGLILEGFVPFDREVSLLAVRGRTGEVAFYPLVENRHWGGILRLSLAPAPGASEALQKKAEAYALRAMEALDYVGVLALEFFQVG-EELLFNEMAPRVHNSGHWTIEGAETSQFENHLRAVLGLPLGST-APRGQSAMVNLIGEKPPF--AEVLKVEGAHLHWYGKA-VRPGRKVGHITLRRDGLKALEEGLARLSRLV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125305 for 3027 contacts (-41.4/contact) +
2D Compatibility (PS) -38561 + (NN) -18831 + (LL) 544
1D Compatibility (HY) -19200 + (ID) 5500
Total energy: -206853.0 ( -68.34 by residue)
QMean score : 0.464
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