Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSVAIIGAGITGLSSAYFLKQQDPNI-DVTIFEASNRPGGKIQSYRKDGYMIELGPESYLGRK----TIMTELAKD-IGLEQDIVTNTT-GQSYIFAKNKLYPIPGGSIMGIPTDIKPFVTTKLISPLGKLRAGLDLIKKPIQMQDGDISVG--AFFRARLG--N-EVLENLIEPL-MGGIYGTDIDKLSLMSTFPNFKEKEEAFGSLIKGMKDEKNKRLKQRQLYPGAPKGQFKQFKHGLSSFIEALEQDVKNK--------GVTIRYNTSVDDIITSQKQYKIVYSNQQEDVFDGVLVTTPHQVFLNWF---GQD-PA-F-DYFKTMDSTTVATVVLAFDEKDIENTYDGTG-FVIARTSDTDITACTWTSKKWPFTTPEGKVLIRAYVGKPGDTVVDDHTDNELVSIVRRDLSQMMTFKG--DPEFTIVNRLPK------SMPQYHVGHIQQIRQIQAHIKQTYPRLRVTGASFE---AVGLPDCITQGKVAAEEVIAEL |
| 1B37 Chain:A ((5-458)) | --PRVIVVGAGMSGISAAKRLSEA--GITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGGKMNPIWPIVNSTLKLRNFRSDFDYLAQNVYKEDGGVYDEDYVQ------KRIEL-ADSVEEMGEK--LSATL-HA---SGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVP-LA-------T----F-SDFG------------DDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEG-KGREFFLYASSR-RGY-YGVWQE--FEKQYP-DANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYE---YDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B37.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133078 for 3480 contacts (-38.2/contact) +
2D Compatibility (PS) -44939 + (NN) -16222 + (LL) 3560
1D Compatibility (HY) -17200 + (ID) 3450
Total energy: -211329.0 ( -60.73 by residue)
QMean score : 0.408
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