Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFK--HWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHY--ELNIFENTVVTNISADDA--YYTIATTT-ETYHADYIFVATGDYNFPKKP-------FKYGIHYSEI--EDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP-------------------------------------------------------------------------DADPSVRLSPYTRQRLGNVIKQGARIEM----NVHYTVKDIDFNNGQYHI----------------------SFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDES----------TRYPNIFMI-GATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC-------------------------------------------- |
| 1W4X Chain:A ((10-542)) | RRQPPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPG----ARCDIESIEYCYSFSEEVLQE----WNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSEREYELDSLVLATGFDAL-TGALFKIDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMFKNGLTRSEAVLEKEDEWVEHVNEIADETLYPMTASWYTGANVPGKPRVFMLYVGGFHRYRQICDEVAAKGYEGFVLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W4X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161877 for 2720 contacts (-59.5/contact) +
2D Compatibility (PS) -37761 + (NN) -6367 + (LL) 268
1D Compatibility (HY) -16800 + (ID) 3450
Total energy: -225987.0 ( -83.08 by residue)
QMean score : 0.336
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