Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTASVFVAGKLLPE-TMEALSK-WDVKAFSGEENITEAELI-NNVTEVDAIICPLSSPISAKVLESAKNLKIVANIGAGFDNIDVKKAQELGIAVTNTPDVSTEATAELTLGLILDVARRISEGDRLCRETPEQFKGWAP--TFFLGTELSGKTLGIIGLGRIGQAVAKRAAAFGMNIIYSGHQPKEAA-KEWNAE-FVSQKELLKRSDVVTIHAAYSPSLKHLLNETTLKTMKSSAFLINAARGPVVEEAALIKALETGVIAGAALDVFEFEPKIG--EDFAKLDNVVLTPHIGNATVETRAAMGKIAIANVEAVLAGKAPLHSVY |
1MX3 Chain:A ((21-338)) | -MPLVALLDGRDCTVEMPILKDVATVAFCDA---QSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIP----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1MX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -184170 for 2511 contacts (-73.3/contact) +
2D Compatibility (PS) -33523 + (NN) -12045 + (LL) 812
1D Compatibility (HY) -14000 + (ID) 5300
Total energy: -248226.0 ( -98.86 by residue)
QMean score : 0.526
|
|
|