Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEMTLAFIEEQYKELDNLNNKE-NPAVLTRNTSTGELFVRKIIPSSF----------APVIEQLKNLSSKYLPKIEVMIPKGNQLIVYEEYINGKNLADLMKTNAPFDTDEVTRLMLMLSDALTELHANAIIHRDIKPSNIMISSDGVLKLIDFDASRMFEVGKNQDTVNLGTIGYAAPEQYGYSQT-DARSDIYSIGVLMLELLLGKNTLPDKEH------------------ATSLEKIAMQAGAFDPEQRYQSIQDFRTAVKNDSLGPSYVSELSDFTELDDSPTESAWKTPADEYENDFIPWYKHIPGFRTGTPWKMIVAVFGYMFLIFGLFSPPTEGVKMSHTVNFFSNFFLIVPAFVIFTNLCGIWSKLPLLKSPSPGTRKAGIVIYIIVCVSIYGIYNEIFS |
| 3H4J Chain:B ((30-282)) | --------HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRI-TIQEIRRD-------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3H4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -83875 for 1642 contacts (-51.1/contact) +
2D Compatibility (PS) -24098 + (NN) -14612 + (LL) 9380
1D Compatibility (HY) -14400 + (ID) 2650
Total energy: -130255.0 ( -79.33 by residue)
QMean score : 0.479
|
|
|