Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKAIVMDFDGIVIDTEVVWYEIFKEWFKTKQNYDLSIEEFLQCVGSNVDDLFRELNEKNQMDINRQVFEAETQATFIENSKSLPAKEGVESFIRELKERGLKLALATSSQRPKPLYHLER-LGLLEYFDAIITAED--VTRIKPEPDLFLEALRALDVKA--SESLIVEDSRNGLLAGNSAGVNVLVIPNEVTKHSDLTPNYLERESLAEVDLTEIMAEYNK
3L5K Chain:A ((29-247))
PVTHLIFDMDGLLLDTERLYSVVFQEICNR-YDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDF--QPELFGLP-
General information:
TITO was launched using:
RESULT:
Template:
3L5K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81508 for 1709 contacts (-47.7/contact) +
2D Compatibility (PS) -22965 + (NN) -8943 + (LL) 228
1D Compatibility (HY) -12400 + (ID) 2500
Total energy: -128088.0 ( -74.95 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_3L5K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L5K-query.scw
PDB file :
Tito_Scwrl_3L5K.pdb
: