Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGMDQQPNPPDVDAFLDSTLVGDDPALAAALAASDAAE-LPRIAVSAQQGKFLCLLAGAIQARRVLEIGTLGGFSTIWLARGAGPQGRVVTLEYQPKHAEVARVNLQRAGVADRVEVVVGPALDTLPTL----AGGPFDLVFIDADKENNVAYIQWAIRLARRGAVIVVDNVIRGGGILAES-DDADAVAARRTLQMMGEHPGLDATAIQTVGRKGWDGFALALVR
3TR6 Chain:A ((10-224))
------LLTPELYQYLLQVSLREPPLLAELREETTRSFSTYAMQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIPIG-----DGLTLARKK
General information:
TITO was launched using:
RESULT:
Template:
3TR6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144666 for 1707 contacts (-84.7/contact) +
2D Compatibility (PS) -23021 + (NN) -13287 + (LL) 384
1D Compatibility (HY) -12400 + (ID) 2950
Total energy: -195940.0 ( -114.79 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_3TR6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TR6-query.scw
PDB file :
Tito_Scwrl_3TR6.pdb
: