Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMRFLDGHPPGYDLTYNDVFIVPNRSEVASRFDVDLSTA--DGSGTTIPVVVANMTAVAGRRMAETVARRGGIVILPQDLPIPAVKQTVAFVKSRDLVLDTPVTLAPDDSVSDAMALIHKRAHGVAVVILEGRPIGLVRESSCLGVDRFTRVRDIAVTDYVTAPAGTEPRKIFDLLEHAPVDVAVLTDADGTLAGVLSRTGAIRAGIYTP-ATDSAGRLRIGAAVGINGDVGAKARALAEAGVDVLVIDTAHGHQVKTLDAIKAVSALDLGLPLAAGNVVSAEGTRDLLKAGANVVKVGVGPGAMCTTRMMTGVGRPQFSAVLECASAARQLGGHIWADGGIRHPRDVALALAAGASNVMIGSWFAGTYESPGDLMRDRDDQPYKESYGMASKRAVVARTGADNPFDRARKALFEEGISTSRMGLDPDRGGVEDLIDHITSGVRSTCTYVGASNLAELHERAVVGVQSGAGFAEGHPLPAGW |
| 3FFS Chain:A ((5-379)) | --------NIGKGLTFEDILLVPNYSEVL-PREVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLK--VKNWI------------------------------------------------------------------------------------------------------------AYSNENLDNKGRLRVGAAIGVN---IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK-MNIDVIVGNVVTEEATKELIENGADGIKVGI---------IVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKEL-IGDTVYKY--------------------------------------RVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKKSSYVEITTS------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183009 for 2501 contacts (-73.2/contact) +
2D Compatibility (PS) -31856 + (NN) -10658 + (LL) 10204
1D Compatibility (HY) -24400 + (ID) 5600
Total energy: -245319.0 ( -98.09 by residue)
QMean score : 0.510
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