Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLMPHSAALNAARRSADLTALADGGALDVIVIGGGITGVGIALDAATRGL-TVALVEKHDLAFGTSRWSSKLVHGGLRYLASGNVGIARRSAVERGILMTRNAPH--LVHAMPQLVPLLPSMGHTKRALVRAGFLAGDALRVLAGTPAATLPRSRRIPASRVVEIAPTVRRDGLDGGLLAYDGQLIDDARLVMAVARTAAQHGARILTYVGASNVTGT--S-VELTDRRTRQSFALSARAVINAAGVWAGEIDPS----LRLRPSRGTHLVFDAKSF-A-NP-TAALTIPIPGELNRFVFAMPEQLGRIYLGLTDEDAP-----------GP---IPDVPQPSSEEITFLLDTVNTALGTAVGTKDVIGAYAGLRPLIDTGGAGVQGRTADVSRDHAVFESPSGVISVVG-G-KLTEYRYMAEDVLNRAITLRHLRAAKCRTRNLPLIGAPANPGPAPGSGAGLPESLVARYGAEAANVAAAATCERPTEPVADGIDVTRAEFEYAVTHEGALDVDDILDRRTRIGLVPRDRERVVAVAKEFLSR |
| 4PAB Chain:A ((41-413)) | ----------------------WKDRAETVIIGGGCVGVSLAYHLAKAGMRDVVLLEKSELTAGSTWHAAGLTTYFHP--GINLKKIHYDSIKLYERLE-EETGQVVGFHQPGSIRLATTPE---------RVDEFKYQMTRTNW----HATEQYIIEPEKIHELFPLLNMDKILAGLYNPGDGHIDPYSLTMALATGARKYGVLLKYPAPVTSLKPRPDGTWDVET---PQ-GSVRANRIVNAAGFWAREVGKMIGLDHPLIPVQHQYVVTSTIPEVKALKRELPVL-RDL--E-GSYYLRQER-DGLLFGPYESQEKMKLQASWVAHGVPPGFGKELFESDLDRITEHVEAAMEMV-PVLKKADIINIVNGPITYSPDIL------P-MVGPHQ----GVRNYWVAIGFGYGIIHAGGVGKYLSDWILHG----------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PAB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204893 for 2955 contacts (-69.3/contact) +
2D Compatibility (PS) -35839 + (NN) -3014 + (LL) 11464
1D Compatibility (HY) -6800 + (ID) 2850
Total energy: -241932.0 ( -81.87 by residue)
QMean score : 0.383
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