Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA
4FKX Chain:A ((11-143))
-SERTFIAVKPDGVQRNLVGEIIKRFENKGYKLVGLKLLQPTEEQAKQHYIDLASKPFYSGLVSYFSSGPIVGMVWEGLGVVKGGRVLLGATNPAD-SLPGTIRGDFAVDVGRNVCHGSDSVESAKREIAFWFKA-
General information:
TITO was launched using:
RESULT:
Template:
4FKX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77890 for 1019 contacts (-76.4/contact) +
2D Compatibility (PS) -14645 + (NN) -6677 + (LL) 496
1D Compatibility (HY) -11600 + (ID) 3150
Total energy: -113466.0 ( -111.35 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_4FKX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FKX-query.scw
PDB file :
Tito_Scwrl_4FKX.pdb
: