Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMG-------------HTIVMGRRTWDSLPAKVRPLPGRRNVVLSR----------------QADFMASGAEVVGSLEEALTS----------PETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLD--------------ETWRGETGEWRFSRSGLRYRLYSYHRS- |
| 3RG9 Chain:A ((23-240)) | RPPLRPFSVVVASDEKGGIGDGGTIPWEIPEDMQYFRRVTTNLRGKNVKPSPSKRNAVVMGRKTWDSLPPKFRPLSNRLNVVLSRSATKEQLLAGIPDPIKRAEAANDVVAVNGGLEDALRMLVSKEHTSSIETVFCIGGGTIYKQALCAPCVNVLQAIHRTVVRPASNSCSVFFDIPAAGTKTPEGLELVRESITDERVSTGAGGKKYQFEKLVPRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72579 for 1198 contacts (-60.6/contact) +
2D Compatibility (PS) -17208 + (NN) -5892 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 2750
Total energy: -108429.0 ( -90.51 by residue)
QMean score : 0.537
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