Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------MPTAAPRWILHVDLDQFLASVELLRHPELA------GLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMPLRTAARRCPEA---TFLPSNPAAYNAASEEVVALLRDLGY--PVEVWGWDEAYLAVAPGTPDDPIEVAEEIRKVILSQT-GLSCSIGISDNKQRAKIATGLAKPAGIYQLTDAN-WMAIMGDRTVEALWGVGPKTTKRLAKL--GINTVYQLAH-TDSGLLMSTFGPRTALWLLL-AKGGGDTEVSAQAWVPRSR------SHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRT---------------ATFYTRTKIRKLQAPSTDPDVITAAARHVLDLFEL-DRPVRLLGVRLELA--- |
| 2AQ4 Chain:A ((1-434)) | KRIVACDDPDFLTSYFAHSRLHHLSAWKANLKDKFLNENIHKYTKITDKDTYIIFHIDFDCFFATVAYLCRSSSFSACDFKRDPIVVCHGT----KNSDIASCNYVARSYGIKNGMWVSQAEKMLPNGIKLISLPYTFEQFQLKSEAFYSTLKRLNIFNLILPISIDEAVCVRII-PDTLNARLCEEIRQEIFQGTNGCTVSIGCSDSLVLARLALKMAKPNGYNITFKSNLSEEFWSSFKLDDLPGVGHSTLSRLESTFDSPHSLNDLRKRYTLDALKASVGSKLGMKIHLALQGQDDEESLKILYDPKEVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLLEKLNEINKTTSQITLKLMRRCKDAPIEPPKYMGMGRCDSFSRSSRLGIPTNEFGIIATEMKSLYRTLGCPPMELRGLALQFNKLVDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172278 for 2498 contacts (-69.0/contact) +
2D Compatibility (PS) -37901 + (NN) -19963 + (LL) -232
1D Compatibility (HY) -18800 + (ID) 3550
Total energy: -252724.0 ( -101.17 by residue)
QMean score : 0.489
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