Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLFARYRDIVDSTA--NPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGP--LTAQQVGQQYLAIVLGGITKEGV
1T56 Chain:A ((22-214))
-------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARAT--SVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE--
General information:
TITO was launched using:
RESULT:
Template:
1T56.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98796 for 1345 contacts (-73.5/contact) +
2D Compatibility (PS) -20113 + (NN) -7790 + (LL) 856
1D Compatibility (HY) -4800 + (ID) 1700
Total energy: -132343.0 ( -98.40 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_1T56.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T56-query.scw
PDB file :
Tito_Scwrl_1T56.pdb
: